CESSHIV-1 database

General information on HIV-1 isolate

# 633

Accession number	DQ351234
Name	03ZASK233B1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	233B1

DQ351234 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagactctt tgtagtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacgcgaa agcgaaagta agaccagagg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy