CESSHIV-1 database

General information on HIV-1 isolate

# 662

Accession number	DQ369996
Name	03ZAPS030MB1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	030MB

DQ369996 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctccggtaac tagagatccc tcagaccctt gttggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agcgaaagta ggaccagagg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy