CESSHIV-1 database

General information on HIV-1 isolate

# 679

Accession number	DQ445632
Name	03ZAPS105MB2
Subtype	C
Country	South Africa
Sampling year	2003
Patient	105MB

DQ445632 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccttt cttggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agcgaaagta agaccagaga agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy