CESSHIV-1 database

General information on HIV-1 isolate

# 680

Accession number	DQ445633
Name	03ZAPS032MB1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	032MB

DQ445633 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtgg ctctggtaac tagagatccc tcagaccctt tttggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agcgaaagtg agaccagagg agaactctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy