CESSHIV-1 database

General information on HIV-1 isolate

# 2784

Accession number	EU170142
Name	luBF_12_04
Subtype	CRF42_BF
Country	Luxembourg
Sampling year	2004

EU170142 isolate has foldings of [PBS region] [123nt 3' terminus] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt ttagtccgtg tggaaaatct ctagcagtgg cgcccgaaca gggacccgaa agcgaaagta gaaccagagg agctctctcg acgcaggac

Isolates with identical sequences of region:

EU170138(#2972)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy