CESSHIV-1 database

General information on HIV-1 isolate

# 1201

Accession number	FJ195089
Name	BREPM1093
Subtype	B
Country	Brazil
Sampling year	2005

FJ195089 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagacactt ttagtcagtg tggaaaatct ctagcagtgg cgcccgaaca gggacctgaa agcgaaagta gaaccagagg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy