CESSHIV-1 database

General information on HIV-1 isolate

# 1202

Accession number	FJ195090
Name	BREPM1066
Subtype	B
Country	Brazil
Sampling year	2004

FJ195090 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagacactt t-agtcagtgt ggaaaatctc tagcagtggc gcccgaacag ggactcgaaa acgaaagtag aaccagagga gctctctcga cgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy