CESSHIV-1 database

General information on HIV-1 isolate

# 2028

Accession number	FJ496080
Name	04013226_2_flH6
Subtype	B
Country	USA
Sampling year	2002
Patient	04013226

FJ496080 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

--tggtaatact ctggtaacta gagatccctc agacc-tttta gtcagtgtgg aaaatctcta gcagtggcgc ccgaacaggg acttgaaagc gaaagagaaa ccagaggaga tctctcgacg caggac

Isolates with identical sequences of region:

FJ496072(#2020) FJ496073(#2021) FJ496074(#2022) FJ496075(#2023) FJ496076(#2024) FJ496077(#2025) FJ496078(#2026) FJ496079(#2027)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy