CESSHIV-1 database

General information on HIV-1 isolate

# 3173

Accession number	FJ670519
Name	X1608-8
Subtype	A1
Country	Spain (Tanzania)
Sampling year	2005
Patient	X1608

FJ670519 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtatga ctctggtaac tagagatccc tcagaccact ggagaccgtg cg-aaaatctc tagcagtggc gcccgaacag ggactcgaaa gcgaaagtt---c cagagaagtt ctctcgacgc aggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy