CESSHIV-1 database

General information on HIV-1 isolate

# 3245

Accession number	FJ670526
Name	X2456_2
Subtype	CRF24_BG
Country	Spain
Sampling year	2008
Patient	X2456

FJ670526 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccact ctagacagtg ta-aaaatctc tagcagtggc gcccgaacag ggacttgaaa gcgaaagtta atagggactc gaaagcgaaa gtt---ccagaga agttctctcg acgcaggac

Isolates with identical sequences of region:

AF064699(#116) AY586549(#677)

CESSHIV-1 DATABASE

General information on HIV-1 isolate

The region encompassing PBS domain

The primary sequence:

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy