General information on HIV-1 isolate
# 3321
| Accession number |
GU733716 |
| Name | N-1 |
| Subtype | B |
| Country | USA |
| Sampling year |
2009 |
| Patient | patient(36090) |
GU733716 isolate has foldings of [DIS region] [PBS region] [Core poly(A) site] [123nt 3' terminus] [USE domain, TAR, polyA] [USE region] [227nt 3' terminus] [Complete poly(A) region] [USE, TAR, polyA] .
The region encompassing PBS domainThe primary sequence:
tgttgtgtga ctctggtaac tagagatccc tcagaccatt ttagtcagtg tggaaaatct ctagcagtgg cgcccgaaca gggaccagaa agcgaaagta gaaccagagg agatctctcg acgcaggac
Isolates with identical sequences of region:
GU733713(#3313)
GU733714(#3319)
GU733715(#3320)
GU733717(#3322)
The optimal secondary structure:
The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy
