General information on HIV-1 isolate
# 1387
| Accession number |
U51295 |
| Name | 93ru131 |
| Subtype | G |
| Country | Russia |
| Sampling year |
1992 |
| Patient | RU131 |
U51295 isolate has foldings of [PBS region] [Core poly(A) site] [123nt 3' terminus] [USE domain, TAR, polyA] [USE region] [227nt 3' terminus] [Complete poly(A) region] [USE, TAR, polyA] .
The region encompassing PBS domainThe primary sequence:
tgttgtttga ctctggtaac tagagatccc tcagaccact ctagacggtg ta-aaaatctc tagcagtggc gcccgaacag ggacttgaaa gtgaaagtta atagggactc gaaagcggaa gtt---ccagaga agttctctcg acgcaggac
The optimal secondary structure:
The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy
