CESSHIV-1 database

General information on HIV-1 isolate

# 226

Accession number	AJ006022
Name	YBF30
Subtype	Group N
Country	Cameroon
Sampling year	1995
Patient	30

AJ006022 isolate has foldings of [DIS region] [PBS region] [Core poly(A) site] [123nt 3' terminus] .

The region encompassing Core poly(A) site

The primary sequence:

ctgggtctct cttgctggac cagattagag cctgggagct ctctggctag c-agggaaccc actgcttaag cctcaataaa gcttgccttg agtgcta-aag tggtgtgtgc ccatccattc ggtaactctg gtac

Isolates with identical sequences of region:

FB675251(#3478)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy