CESSHIV-1 database

General information on HIV-1 isolate

# 39

Accession number	AJ006287
Name	89ES061
Subtype	B
Country	Spain
Sampling year	1989
Patient	89ES061

AJ006287 isolate has foldings of [DIS region] [PBS region] [Core poly(A) site] [123nt 3' terminus] .

The region encompassing Core poly(A) site

The primary sequence:

--gggtctctct tgttagacca gatctgagcc tgggagctct ctggctaact agggaaccca ctgcttaagc ctcaataaag cttgccttga gtgcttcaag tagtgtgtgc ccgtctgttg tgtgactctg atag

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy