CESSHIV-1 database

General information on HIV-1 isolate

# 3152

Accession number	EF370207
Name	93LSH6_1741s
Subtype	B
Country	South Korea
Sampling year	1993
Patient	LSH

EF370207 isolate has foldings of [Core poly(A) site] [USE domain, TAR, polyA] [USE region] [Complete poly(A) region] [USE, TAR, polyA] .

The region encompassing Core poly(A) site

The primary sequence:

ctgggtctct ctggttagac cagatctgag cctgggagct ctctggctaa ctagggaacc cactgcttaa gcctcaataa agcttgcctt gagtgcttta agtagtgtgt gcccatctgt tgtgtgactc tggtaa

Isolates with identical sequences of region:

EF370206(#1711) U81472(#2577)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy