CESSHIV-1 database

General information on HIV-1 isolate

# 1782

Accession number	EF370343
Name	00YKW1_2711
Subtype	B
Country	South Korea
Sampling year	2000
Patient	YKW

EF370343 isolate has foldings of [DIS region] [PBS region] [Core poly(A) site] [123nt 3' terminus] .

The region encompassing Core poly(A) site

The primary sequence:

ctgggtctct ctggttagac cagatccgag cctgggagct ctctggctag ctagggaacc cactgcttaa gcctcaataa agcttgcctt gagtgcttca agtagtgtgt gcccgtctgt tgtgtgactc tggtaa

Isolates with identical sequences of region:

AY851683(#2104) EF370365(#1795) GU595154(#3323)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy