CESSHIV-1 database

General information on HIV-1 isolate

# 2519

Accession number	U67768
Name	TW356
Subtype	U
Country	Taiwan
Submitted to NCBI	1996

U67768 isolate has foldings of [PBS region] [Core poly(A) site] [123nt 3' terminus] [USE domain, TAR, polyA] [USE region] [227nt 3' terminus] [Complete poly(A) region] [USE, TAR, polyA] .

The region encompassing Core poly(A) site

The primary sequence:

ctgggtctct cttgttagac cagata-gagc ctgggagctc tctgactagc aagggaaccc actgcttaag cctcaataaa gcttgccttg agtgctacaa gtagtgtgtg cccgtctgtt gtgtgagtgt ggtaa

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy