CESSHIV-1 database

General information on HIV-1 isolate

# 2524

Accession number	U73099
Name	TW384
Subtype	B
Country	Taiwan
Submitted to NCBI	1996

U73099 isolate has foldings of [PBS region] [Core poly(A) site] [123nt 3' terminus] [USE domain, TAR, polyA] [USE region] [227nt 3' terminus] [Complete poly(A) region] [USE, TAR, polyA] .

The region encompassing 227 nt 3' terminus

The primary sequence:

cgagccctca gatgctgcat ataagcagct gctttt-gcct gtactgggtc tctctggtta gaccagatct gagcctggga gctctctggc tagctaggga acccactgct taagcctcaa taaagcttgc cttgagtgct tcaagtagtg tgtgcccgtc tgttgtgtga ctctggtaac tagagatccc tcagaccctt ttagtcagtg tggaaaatct ctagca

Isolates with identical sequences of region:

AF196708(#1279)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy