General information on HIV-1 isolate
# 1399
| Accession number |
AF170548 |
| Name | 93TH902-1 |
| Subtype | CRF01_AE |
| Country | Thailand |
| Sampling year |
1993 |
AF170548 isolate has foldings of [DIS region] [PBS region] [Core poly(A) site] [123nt 3' terminus] [USE domain, TAR, polyA] [USE region] [227nt 3' terminus] [Complete poly(A) region] [USE, TAR, polyA] .
The region encompassing USE regionThe primary sequence:
gttggggagt ggttaaccct caaatgctgc ataaaagcag ccgctcttcg cttgtactga gtctctcttg ttaaaccagg tc-gagcccgg gagctctctg gctagcaagg gaacccactg cctaatgcct caataaagct tgccttgagt gcttaaagtg gtgt
Isolates with identical sequences of region:
AF164485(#88)
The optimal secondary structure:
The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy
