CESSHIV-1 database

General information on HIV-1 isolate

# 2947

Accession number	EU047676
Name	06YJN1_2453s
Subtype	B Korean
Country	South Korea
Sampling year	2006
Patient	YJN

EU047676 isolate has foldings of [USE, TAR, polyA] .

The region encompassing USE, TAR, polyA

The primary sequence:

agcagctgct ttctgcctgt actgggtctc tctggttaga ccagatctga gcctgggagc tctctggcta gctagggaac ccactgctta agcctcaata aagcttgcct tgagtgcttc aagtagt

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy