CESSHIV-1 database

General information on HIV-1 isolate

# 3141

Accession number	U37268
Name	C98
Subtype	B
Country	Australia
Submitted to NCBI	1995
Patient	C98

U37268 isolate has foldings of [Core poly(A) site] [USE domain, TAR, polyA] [USE region] [Complete poly(A) region] [USE, TAR, polyA] .

The region encompassing USE, TAR, polyA

The primary sequence:

agcagctgct ttctgcctgt actgggtctc tctggttaga ccagatctga gcctgggagc tctctggctg actagggaac ccactgctta agcctcaata aagcttgcct tgagtgcttc aagtagtgt

Isolates with identical sequences of region:

AB480692(#2717) AB480693(#2718) DQ287304(#3472)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy