CESSHIV-1 database

General information on HIV-1 isolate

# 270

Accession number	AB097871
Name	mIDU101_3
Subtype	C
Country	Myanmar
Sampling year	1999
Patient	mIDU101

AB097871 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag g-ggcgactgg tgagtacgcc aatttttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AY049708(#231) AY049710(#233) AY049711(#234) DQ093593(#497) DQ164115(#552) DQ351221(#620) DQ369998(#664)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy