CESSHIV-1 database

General information on HIV-1 isolate

# 68

Accession number	AF107770
Name	SE7812
Subtype	CRF02_AG
Country	Sweden
Sampling year	1994

AF107770 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gggactcggc ttgctgaggt gcacacagca agaggcgaga g-cggcgactg gtgagtacgc caat--ttttga ctagcggagg ctagaaggag aga

Isolates with identical sequences of region:

AB485633(#2736) FJ614971(#2391) FJ614973(#2392) FJ614975(#2394) FJ614995(#2406) FJ614996(#2407) FJ614997(#2408) FJ614998(#2409) FJ614999(#2410)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy