CESSHIV-1 database

General information on HIV-1 isolate

# 175

Accession number	AF443077
Name	98BWMC13.4
Subtype	C
Country	Botswana
Sampling year	1998
Patient	MC134

AF443077 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag a-ggcggctgg tgagtacgcc aaattttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AY118166(#281) AY162225(#241) DQ351227(#626)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy