CESSHIV-1 database

General information on HIV-1 isolate

# 185

Accession number	AF443087
Name	99BWMC16.8
Subtype	C
Country	Botswana
Sampling year	1999
Patient	MC168

AF443087 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacggcaa gaggcgagag -cggcggctgg tgagtacgcc aatttttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

GQ999972(#3292)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy