CESSHIV-1 database

General information on HIV-1 isolate

# 1431

Accession number	DQ167215
Name	EST2002_1169
Subtype	CRF32_06A1
Country	Estonia
Sampling year	2002
Patient	1169

DQ167215 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacggcaa gaggcgagag cggcgcmctg gtgagtacgc caaat-ttttg actagcagag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy