CESSHIV-1 database

General information on HIV-1 isolate

# 1223

Accession number	DQ275645
Name	03ZAPS091MB1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	091MB

DQ275645 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

agactcggct tgctgaagtg cactcggcaa gaggcgagag -cggcggctgg tgagtacgcc aatttttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

DQ275658(#1236)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy