CESSHIV-1 database

General information on HIV-1 isolate

# 750

Accession number	DQ358810
Name	02BR013
Subtype	B
Country	Brazil
Sampling year	2002
Patient	BR013

DQ358810 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaaataaa attttgacta gcggaggcta gaaggagaga 

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy