CESSHIV-1 database

General information on HIV-1 isolate

# 1608

Accession number	EF178310
Name	MS2004_37_012
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (9050046)

EF178310 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggc gaggcgactg gtgagtaccc caaaaatttt tttgactagc ggaggctaga aggagara

Isolates with identical sequences of region:

AY857160(#1656)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy