CESSHIV-1 database

General information on HIV-1 isolate

# 1610

Accession number	EF178314
Name	MS2004_37_016
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (9590727)

EF178314 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaaagc gcgctcggca agaggcgagg ggyggcgact ggtgagtacg ccaaaa-tttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

AY857180(#1645)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy