CESSHIV-1 database

General information on HIV-1 isolate

# 1679

Accession number	EF178352
Name	MS2004_37_054
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (9060341)

EF178352 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc caaaaaattt ttgactagcg gaggctagaa ggagaga

Isolates with identical sequences of region:

AY857162(#1657)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy