CESSHIV-1 database

General information on HIV-1 isolate

# 1688

Accession number	EF178385
Name	MS2004_37_087
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (6700728)

EF178385 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctga-gcgc gcacggcaag aggcgagggg cggcgactgg tgagtacgcc aaaaaacttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AY857101(#1646)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy