CESSHIV-1 database

General information on HIV-1 isolate

# 1691

Accession number	EF178397
Name	MS2004_37_099
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (9300435)

EF178397 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagyg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc cgaaaatttt ttgactagcg gaggctagaa ggagaga

Isolates with identical sequences of region:

AY857171(#1658)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy