CESSHIV-1 database

General information on HIV-1 isolate

# 1871

Accession number	EU047677
Name	07YJN2_3212
Subtype	B Korean
Country	South Korea
Sampling year	2007
Patient	YJN

EU047677 isolate has foldings of [DIS region] [PBS region] [Core poly(A) site] [123nt 3' terminus] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgaccg gtgagtacgc caaaatattt ttgactagcg gaggctagaa ggagaga

Isolates with identical sequences of region:

EF370289(#1743) EF370291(#1744)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy