CESSHIV-1 database

General information on HIV-1 isolate

# 2788

Accession number	EU170146
Name	luBF_11_04
Subtype	CRF42_BF
Country	Luxembourg
Sampling year	2004

EU170146 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaaatttt gactagsgga ggctagaagg agaga

Isolates with identical sequences of region:

EU170144(#2786)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy