CESSHIV-1 database

General information on HIV-1 isolate

# 1904

Accession number	FJ389363
Name	178_15
Subtype	G
Country	Cameroon
Sampling year	2004
Patient	178_15

FJ389363 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc aaaatttttg actagcggag gctagaagga gaga

Isolates with identical sequences of region:

AF084936(#59) AY586540(#452)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy