CESSHIV-1 database

General information on HIV-1 isolate

# 2605

Accession number	FJ496149
Name	SUMA_flE5
Subtype	B
Country	USA
Sampling year	1991
Patient	SUMA0874

FJ496149 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc cgaaaatttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

EU786680(#1193) FJ496145(#2601) FJ496146(#2602) FJ496147(#2603) FJ496148(#2604) FJ496150(#2606)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy