CESSHIV-1 database

General information on HIV-1 isolate

# 1193

Accession number	EU786680
Name	ES X2231 (B)
Subtype	B
Country	Spain
Sampling year	2007
Patient	2231

EU786680 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc cgaaaatttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

FJ496145(#2601) FJ496146(#2602) FJ496147(#2603) FJ496148(#2604) FJ496149(#2605) FJ496150(#2606)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy