CESSHIV-1 database

General information on HIV-1 isolate

# 3299

Accession number	FJ614989
Name	00NYR1_4197
Subtype	CRF02_AG
Country	South Korea
Sampling year	2000
Patient	NYR

FJ614989 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gggactcggc ttgctgaagt gcacacagca agaggcgaga g-cggcgactg gtgagtacgc caat--ttttga ctagcagagg ctagaaggag aga

Isolates with identical sequences of region:

FJ614978(#2396) FJ614979(#3355)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy