CESSHIV-1 database

General information on HIV-1 isolate

# 2764

Accession number	FM877780
Name	02CD_KS069
Subtype	CRF26_AU
Country	DRC
Sampling year	2002
Patient	KS069

FM877780 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctga-gtgc acacagcaag aggcgaggag cggcgactgg tgagtacgcc aaaaagtttt gactagcgga ggctaaaagg aaaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy