CESSHIV-1 database

General information on HIV-1 isolate

# 3205

Accession number	GQ324962
Name	U14296
Subtype	Group N
Country	Cameroon
Sampling year	2006
Patient	U14296

GQ324962 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct cgttg--gtgca cacagcgaga ggcgaggcgg cggaagtg-tg agtacgca----at tttaactggc ggtggccaga aagtaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy