CESSHIV-1 database

General information on HIV-1 isolate

# 3840

Accession number	GU362881
Name	P2149_3
Subtype	B
Country	Spain
Sampling year	2009
Patient	P2149

GU362881 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg caca--gcaaga ggcgaggggc agcgactggt gagtacgcca aaactttttt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy