CESSHIV-1 database

General information on HIV-1 isolate

# 3329

Accession number	HM026457
Name	07BR_FPS742
Subtype	CRF46_BF
Country	Brazil
Sampling year	2007
Patient	FPS742

HM026457 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacggcaa gaggcgagag -cggcgactgg tgagtacgcc aaa--ttttgac tagcagaggc tagaaggaga ga

Isolates with identical sequences of region:

DQ189088(#2213) FJ771006(#1852) HM026456(#3295) HM026460(#3347)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy