CESSHIV-1 database

General information on HIV-1 isolate

# 41

Accession number	U51190
Name	92ug037
Subtype	A1
Country	Uganda
Sampling year	1992
Patient	UG037

U51190 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc att--ttttgac tagcggaggc tagaaggaga ga

Isolates with identical sequences of region:

AB253421(#904) AB253422(#905) AB253429(#912) AY322193(#380) EU110096(#1041) FJ864679(#1427)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy