CESSHIV-1 database

General information on HIV-1 isolate

# 305

Accession number	AY169812
Name	98CMU2901
Subtype	Group O
Country	Cameroon
Sampling year	1998
Patient	2901

AY169812 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttca---accc tggtatctag agatccctca gatcacgt-ag actgaggcga aaatctctag cagtggcgcc cgaacaggga ccggaa-gaga aagtgaaacc agggaagaaa ac-ctc-cgacg caacgggc

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy