CESSHIV-1 database

General information on HIV-1 isolate

# 396

Accession number	AY455779
Name	94BR-RJ-97
Subtype	BF
Country	Brazil
Sampling year	1994
Patient	BR97

AY455779 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatc t-agtcagtgt ggaaaatctc tagcagtggc gcccgaacag ggacccgaaa gcgaaagtag aaccagagga gctctctcga cgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy