CESSHIV-1 database

General information on HIV-1 isolate

# 327

Accession number	AY463229
Name	C.ZA.1119MB
Subtype	C
Country	South Africa
Sampling year	2000
Patient	1119M

AY463229 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtatc tagagatccc tcagaccatt ttggt-agtgt ggaaaatctc tagcagtggc gcccgaacag ggacccgaaa gcgaaagtga gaccagagaa gatctctcga cgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy