CESSHIV-1 database

General information on HIV-1 isolate

# 489

Accession number	DQ093585
Name	04ZASK083B2
Subtype	C
Country	South Africa
Sampling year	2004
Patient	083B2

DQ093585 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt ttggt-agtgt ggaaaatctc tagcagtggc gcccgaacag ggacttgaaa gcgaaagtga gaccagagga gatctctcga cgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy