CESSHIV-1 database

General information on HIV-1 isolate

# 621

Accession number	DQ351222
Name	02ZAPS013MB1
Subtype	C
Country	South Africa
Sampling year	2002
Patient	013MB

DQ351222 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctgggaac tagagatccc tcagacc-ttt gcggctgtgt ggaaaatctc tagcagtggc gcccgaacag ggacttgaaa gcgaaagtaa gaccagagga gatctctcga cgcaagac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy