CESSHIV-1 database

General information on HIV-1 isolate

# 625

Accession number	DQ351226
Name	03ZAPS025MB1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	PS-025M

DQ351226 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccctt gttggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacctgaa agcgaaagta agaccagaga agatctctcg acgcaggac

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy